Playbook r-workbench

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Summary

This component installs R as well as optionally installing desired R packages.

Requires

• OS: Ubuntu >= 18

Description

Uses the external role oefenweb.ansible-r (see here) to install R and dependencies.

Variables

• r_workbench_version: Optional. String. Version of R to install. Default: 40 (install R > 4.0).
• r_workbench_cran_mirror: Optional. String. URL to a CRAN mirror to use for installing packages. Default: https://cran.rstudio.com/.
• r_workbench_packages: Optional. String. A list of YAML objects defining R packages to be installed. For example:

- { name: dplyr }
- { name: Biobase, type: bioconductor }
- { name: mangothecat/franc, type: github }

See the external role for more documentation.

History

2024 Written by Dawa Ometto (Utrecht University)

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